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Table 1 Correlation between the type of substitution and the exerted mechanism of action

From: Versatile mechanisms of 2-substituted benzimidazoles in targeted cancer therapy

Type of substitution

Mechanism of action

References

1-CH3

2-Aliphatic acid derivative

5- Nitrogen mustard

Alkylating agent

[31, 32]

1,2-fused

5-Amide

6- CH3

Alkylating agent

[33]

2-Acridine

DNA binding agent

[34]

2-Aromatic

6-Oxindole

DNA binding agent

[35]

Head to tail bisbenzimidazole

5-Aromatic/piperazine

DNA binding agent

[36]

1-Aromatic

2-Aromatic

5-Ester

DNA binding agent

[37]

1,2-Fused

DNA binding agent

[38-40]

Cu complex with tetrabenzimidazoles

DNA binding agent

[41]

2-Indole

4-Aromatic

Tubulin inhibitor

[45]

2-Pyrazole

6-Aliphatic/halogen

Tubulin inhibitor

[46]

2-Carbamate

5-Se connector/indole

Tubulin inhibitor

[47]

2-Urea

5-O-linker-Aromatic

Tubulin inhibitor

[48]

2-Aromatic

4-H/OH/CH3

Tubulin inhibitor

[49]

1-Aromatic ketone

2-Aromatic

Tubulin inhibitor

[50]

1,2-Aromatic

5-Ester

Sirtuin 1&2 inhibitor

[56]

2-Piperidine

4-Carboxamide

Poly (ADP-ribose) polymerase inhibitor

[58]

2-Aromatic

4- Carboxamide

5/6-Halogen

Poly (ADP-ribose) polymerase inhibitor

[59, 60]

2-Aromatic

3,4-Fused

Poly (ADP-ribose) polymerase inhibitor

[61]

2-CH2-OH

5-NO2

Methionine synthase inhibitors

[63]

2-Aromatic amide

5-NO2

Methionine synthase inhibitors

[64]

1-Aromatic

2-CH3

6-Triazine

DHFR inhibitor

[67]

1-Aromatic

2-CH3

6-Hetero-aromatic

DHFR inhibitor

[68]

2-Aromatic

Topoisomerase I&II inhibitors

[71, 72]

2-Aromatic

4-Ester

Topoisomerase I&II inhibitors

[73]

Head to tail bisbenzimidazole

2-Aromatic

5-piperazine

Topoisomerase I&II inhibitors

[74,75]

Cu comlex

2-Pyridine

5-COOH

Topoisomerase I&II inhibitors

[76]

1-Aromatic

2-C=O

3-Aliphatic

5-NO2

Androgen receptor antagonistic activity

[78]

1-Aromatic

2-Aliphatic

5, 6-Halogen

Androgen receptor antagonistic activity

[79]

2-Aromatic

5,6-Aliphatic

α-glucosidase inhibitors

[82]

1,2-Aromatic

5-Amide

G9a Histone Methyltransferase inhibitors

[85]

1-Hetero-aromatic

2-Aromatic

Pyruvate kinase inhibitors

[88]

Head to Head bisbenzimidazoles

2-Hetero-aromatic connector

6-Piperazine

Telomerazse inhibitors

[89]

Tribenzimidazoles

2-Aromatic

6-Piperazine

Telomerazse inhibitors

[90]

5,6-Fused

2-Cyclic amine/piperazine

Telomerazse inhibitors

[91]

2-Aromatic

VEGFR-2 inhibitor

[98]

2-Aromatic

6-Quinoline

VEGFR-2 inhibitor

[92]

1-Aromatic

2-Furan

VEGFR-2 inhibitor

[99]

1-Amide/Heteroaromatic

2-Furan

VEGFR-2 inhibitor

[100]

2-Amide

5,6-Aliphatic

VEGFR-2 inhibitor

[101]

2-Oxadiazole

EGFR inhibitors

[107]

1-Aliphatic amine

2-Amide

6-Halogen

EGFR inhibitors

[108]

2-Indazole

5-Piperazine

FGFR1 inhibitors

[110]

2-Aromatic ketone

6-Aliphatic

FGFR1 inhibitors

[111]

2-Pyrrolopyrimidine

5-Sulfonyl/urea

Tie-2 receptor tyrosine kinase inhibitors

[95]

2-Aromatic

5, 6-Aliphatic

Heparanase inhibitors

[114]

2-Aromatic

COX1&2 inhibitors

[117]

2-Pyrazole

5-Aliphatic amine

Aurora A/B kinase inhibitors

[120]

2-NH-aromatic

5-CF3

Aurora A/B kinase inhibitors

[121]

2-Pyrazole

5-Morpholine

Aurora A/B kinase inhibitors

[122]

1,2-Aliphatic

5-Hetero-aromatic

Aurora A/B kinase inhibitors

[123]

2-Hetero-aromatic

Checkpoint kinase (Chk1&Chk2) inhibitors

[127]

2-Hetero-aromatic

Checkpoint kinase (Chk1&Chk2) inhibitors

[128]

2-Aromatic

5-Amide

Checkpoint kinase (Chk1&Chk2) inhibitors

[129]

2-Aromatic

5-COOH/Amide

Checkpoint kinase (Chk1&Chk2) inhibitors

[130]

2-CH3

5-Pyrazole

Checkpoint kinase (Chk1&Chk2) inhibitors

[131]

2-Aliphatic amines/CF3

4,5,6,7-Halogen

Protein kinase rhCK2α inhibitor

[135, 136]

2- CF3

4,5,6,7-Halogen

Protein kinase rhCK2α inhibitor

[137]

2- CH3

4,5,6,7-Halogen

Protein kinase rhCK2α inhibitor

[138]

2-Pyrazolo-pyridine

4-Aliphatic

Cyclin-dependant kinase (CDK) inhibitors

[140]

2-Hetero-aromatic

4-Morpholine

7-Aliphatic

Insulin-like growth factor receptor-1 (IFG-1R) inhibitors

[144]

1-Triazine

2-Halogen

Allosteric Mitogen-Activated Protein Kinase (MEK1) and Phosphatidylinositol 3-Kinase (PI3K) inhibitors

[147]

2-Hetero-aromatic

allosteric Mitogen-Activated Protein Kinase (MEK1) and Phosphatidylinositol 3-Kinase (PI3K) inhibitors

[148]

1,2-Aromatic

Farnesyl binding pocket of PDEδ inhibitor

[141]

1-Triazine

2-CHF2

3-O-linker

Farnesyl binding pocket of PDEδ inhibitor

[143]

2-Aromatic

6-Quinazolin

Dual c-Met and VEGFR-2 inhibitors

[145]

2-Hetero-aromatic

6-Piperazine

Multi-target receptor tyrosine kinase inhibitors

[147]

2-Pyrole

6-Amide

Multi-target receptor tyrosine kinase inhibitors

[148]

2-Pyrazine

6-Aliphatic amine

Multi-target receptor tyrosine kinase inhibitors

[149]

1-Aliphatic

2-Aromatic amine

Multi-target receptor tyrosine kinase inhibitors

[149]